{"id":"VC0028","type":"paper","title":"STPath: a generative foundation model for integrating spatial transcriptomics and whole-slide images.","authors_or_org":"Huang T, Liu T, Babadi M, Ying R, Jin W.","date":"2025-11-14","year":"2025","venue":"NPJ digital medicine","url":"https://doi.org/10.1038/s41746-025-02020-3","doi":"10.1038/s41746-025-02020-3","pmid":"41238784","brain_tumor_focus":"partial","tags":["spatial","pathology","generative"],"tag_slugs":["spatial","pathology","generative"],"tag_labels":["Spatial omics","Pathology","Generative AI & diffusion"],"tag_labels_zh":["空间组学","病理","生成式 AI 与扩散模型"],"unmapped_tags":[],"one_line_summary_en":"STPath: generative model linking WSIs and spatial transcriptomics.","one_line_summary_zh":"STPath：整合全切片图像与空间转录组的生成模型。","verified":"yes","verification_source":"Europe PMC","page_url":"https://gliostate.com/library/VC0028/","api_url":"https://gliostate.com/api/items/VC0028.json","sameAs":["https://doi.org/10.1038/s41746-025-02020-3","https://pubmed.ncbi.nlm.nih.gov/41238784/"],"is_preprint":false,"facets":{"type":"https://gliostate.com/library/type/paper/","year":"https://gliostate.com/library/year/2025/","tags":["https://gliostate.com/library/tag/spatial/","https://gliostate.com/library/tag/pathology/","https://gliostate.com/library/tag/generative/"]},"cited_by":[],"related":[{"id":"VC0026","title":"A visual-omics foundation model to bridge histopathology with spatial transcriptomics.","shared_tags":["spatial","pathology"],"page_url":"https://gliostate.com/library/VC0026/","api_url":"https://gliostate.com/api/items/VC0026.json"},{"id":"VC0114","title":"Bioptimus: multimodal biology foundation model (NVIDIA compute)","shared_tags":["pathology"],"page_url":"https://gliostate.com/library/VC0114/","api_url":"https://gliostate.com/api/items/VC0114.json"},{"id":"VC0039","title":"Towards a general-purpose foundation model for computational pathology.","shared_tags":["pathology"],"page_url":"https://gliostate.com/library/VC0039/","api_url":"https://gliostate.com/api/items/VC0039.json"},{"id":"VC0138","title":"PerturbLDM: conditional latent diffusion for modelling single-cell perturbation responses","shared_tags":["generative"],"page_url":"https://gliostate.com/library/VC0138/","api_url":"https://gliostate.com/api/items/VC0138.json"},{"id":"VC0077","title":"Generative AI for spatial tumor growth on MRI: a proof-of-principle study in pediatric diffuse midline glioma.","shared_tags":["generative"],"page_url":"https://gliostate.com/library/VC0077/","api_url":"https://gliostate.com/api/items/VC0077.json"},{"id":"VC0033","title":"X-Cell: Scaling Causal Perturbation Prediction Across Diverse Cellular Contexts via Diffusion Language Models","shared_tags":["generative"],"page_url":"https://gliostate.com/library/VC0033/","api_url":"https://gliostate.com/api/items/VC0033.json"}]}