paperPartly relevant✓ VerifiedVC0039
Chen RJ et al. · Nature medicine · 2024-03-19
UNI: general-purpose computational pathology foundation model (incl. brain tumor tasks).
DOIPubMed
paperPartly relevant✓ VerifiedVC0028
Huang T, Liu T, Babadi M, Ying R, Jin W. · NPJ digital medicine · 2025-11-14
STPath: generative model linking WSIs and spatial transcriptomics.
DOIPubMed
orgPartly relevant✓ VerifiedVC0114
Bioptimus · Bioptimus news · 2025-06-11
French startup building multiscale biology FMs (H-Optimus pathology models).
Source
paper✓ VerifiedVC0025
Blampey Q, Benkirane H, Bercovici N, Mulder K, Gessain G, Ginhoux F, André F, Cournède PH. · Nature methods · 2025-12-10
Novae: graph-based foundation model for spatial transcriptomics.
DOIPubMed
paper✓ VerifiedVC0024
Tejada-Lapuerta A, Schaar AC, Gutgesell R, Palla G, Halle L, Minaeva M, Vornholz L, Dony L, Drummer F, Richter T, Bahrami M, Theis FJ. · Nature methods · 2025-10-30
Nicheformer (Theis lab): single-cell + spatial foundation model, Nat Methods 2025.
DOIPubMed
preprint✓ VerifiedVC0023
Wen H, Tang W, Dai X, Ding J, Jin W, Xie Y, Tang J. · bioRxiv · 2023-10-05
CellPLM: cell language model beyond single cells (spatial context).
DOI